Soemedi R, Vega H, Belmont JM, Ramachandran S, Fairbrother WG (in press) 'Genetic variation and RNA binding proteins: tools and techniques to detect functional polymorphisms', In: Systems and molecular perspectives to RNA binding protein biology, ed. G Yeo. Springer.
Leiserson MDM, Eldridge J, Ramachandran S, Raphael BJ (2013) 'Network analysis of GWAS data'. Current Opinion in Genetics and Development Vol. 23:602-610.
Porder S, Ramachandran S (2012) 'The phosphorus content of common rocks - a potential driver of ecosystem P status'. Plant and Soil Vol. 367:41-55.
Wakeley J, King L, Low BS, Ramachandran S (2012) 'Gene genealogies within a fixed pedigree, and the robustness of Kingman’s coalescent'. Genetics Vol. 190:1433-1445. [pdf]
Ramachandran S, Rosenberg NA (2011) 'A test of the influence of continental axes of orientation on patterns of human gene flow'. American Journal of Physical Anthropology Vol. 146:515-529.
Novembre J, Ramachandran S (2011) 'Perspectives on human population structure at the cusp of the sequencing era'. Annual Review of Genomics and Human Genetics Vol. 12:245-274. [pdf]
Henn BM, Gignoux CR, Jobin M, Granka JM, Macpherson JM, Rodriguez-Botigue L, Ramachandran S, et al. (2011) 'Hunter-gatherer genomic diversity suggests a southern African origin for modern humans'. PNAS Vol. 108:5154-5162.
Ramachandran S, Tang H, Gutenkunst R, Bustamante CD (2010) 'Genetics and genomics of human population structure' pp. 589-616. In: Vogel and Motulsky's Human Genetics: Problems and Approaches, 4th ed., eds. M Speicher, SE Antonarakis, AG Motulsky. Springer.
Casto AM, Li JZ, Absher D, Myers R, Ramachandran S, Feldman MW (2010) 'Characterization of X-linked SNP genotypic variation in globally distributed human populations'. Genome Biology Vol. 11:R10.
Ramachandran S, Feldman MW (2009) 'Theory of migration: Implications for linguistic evolution'. In: Ancient Human Migrations: A Multidisciplinary Approach, eds. PN Peregrine, I Peiros, MW Feldman. University of Utah Press.
Bustamante CD, Ramachandran S (2009) 'Evaluating signatures of sex-specific processes in the human genome'. Nature Genetics (News and Views) Vol. 41:8-10.
Ramachandran S, Rosenberg NA, Feldman MW, Wakeley J (2008) 'Population differentiation and migration: coalescence times in a two-sex island model for autosomal and X-linked loci'. Theoretical Population Biology Vol. 74:291-301.
Li JZ, Absher DM, Tang H, Southwick AM, Casto AM, Ramachandran S, Cann HM, Barsh GS, Feldman M, Cavalli-Sforza LL, Myers RM (2008) 'Worldwide human relationships inferred from genome-wide patterns of variation'. Science Vol. 319:1100-1104.
Wang S, Lewis Jr. CM, Jakobsson M, Ramachandran S, Ray N, et al. (2007) 'Genetic variation and population structure in Native Americans'. PLoS Genetics Vol. 3:e185.
Rosenberg NA, Mahajan S, Ramachandran S, Zhao C, Pritchard JK, Feldman MW (2005) 'Clines, clusters, and the effect of study design on the inference of human population structure'. PLoS Genetics Vol. 1:e70.
Ramachandran S, Deshpande O, Roseman CC, Rosenberg NA, Feldman MW, Cavalli-Sforza LL (2005) 'Support from the relationship of genetic and geographic distance in human populations for a serial founder effect originating in Africa'. PNAS Vol. 102:15942-15947.
Macpherson JM, Ramachandran S, Diamond L, Feldman MW (2004) 'Demographic estimates from Y-chromosome microsatellite polymorphisms: analysis of a worldwide sample'. Human Genomics Vol. 1:345-354.
Ramachandran S, Rosenberg NA, Zhivotovsky L, Feldman MW (2004) 'Robustness of the inference of human population structure: a comparison of X-chromosomal and autosomal microsatellites'. Human Genomics Vol. 1:87-97.